Plant & Animal Genome Sequencing

SAMPLE REQUIREMENTS

Sample quality directly impacts sequencing quality and subsequent bioinformatics analysis. Therefore, NGB Diagnostics has extensive sample quality control procedures to ensure submitted samples conform to requirements for downstream processing.To guarantee the normal processing of your project, samples should meet the standards given below

Notes :

  • Samples not meeting these specifications should be designated as “at risk” by the customer, and will be subject to billing regardless of data quality. Please consult the Project Manager for further details.
  • Input quantity should be determined by Qubit® instead of by NanoDropTM, and the final quantity and concentration should conform to NGB Diagnostics specifications
Library Type Sample Type Amount (Qubit) Volume Concentration Purity
(NANODROPTM/AGAROSE GEL)
Strongly Recommended Required
< 500 bp Insert Genomic DNA > 2 ug > 1 ug > 20 uL > 50 ng/uL No degradation, no contamination
Genomic DNA (PCR-free) > 3 ug > 1.5 ug > 20 uL > 50 ng/uL
Mitochondrion / Choloroplast DNA > 1.6 ug > 800 ug > 20 uL > 50 ng/uL
2 Kb Genomic DNA > 30 ug > 15 ug > 20 uL > 50 ng/uL
5 Kb Insert Genomic DNA > 30 ug > 15 ug > 20 uL > 50 ng/uL
10 Kb Insert Genomic DNA > 50 ug > 25 ug > 20 uL > 50 ng/uL
> 10 Kb Insert Genomic DNA > 80 ug > 40 ug > 20 uL > 50 ng/uL
Prokaryotic RNA  -  Seq Total RNA > 6 ug > 3 ug > 20 uL > 6.0, smooth base line
Amplification
products
from single
cells or
low input
RNA
cDNA > 20 ug > 10 ug  -  Peak range:
400 bp - 9000 bp
Main peak:
1200 bp - 2500 bp